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For visualizing multiple STAR reports at once, many researchers use MultiQC , which can aggregate these .final.out files into a single, interactive HTML report. alexdobin/STAR: RNA-seq aligner - GitHub

Use the following command to download the static binary, which is the easiest to use as it has no external library dependencies: wget https://github.com chmod +x STAR Use code with caution. Download STAR bin

Reads that map to more than one location. For visualizing multiple STAR reports at once, many

STAR --runThreadN [threads] \ --genomeDir /path/to/index/ \ --readFilesIn read1.fastq read2.fastq \ --outFileNamePrefix SampleName_ Use code with caution. 4. Interpretation of the Report many researchers use MultiQC